STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH89774.1Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator. (326 aa)    
Predicted Functional Partners:
CCH90863.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; factor.
    
 0.807
CCH90436.1
Cell envelope-related transcriptional attenuator (fragment).
 
  
 0.802
CCH87484.1
Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
    0.801
CCH89773.1
Putative LPXTG-motif cell wall anchor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.773
CCH90040.1
Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.771
sufR
Iron-sulfur cluster transcriptional regulator; Function of strongly homologous gene; factor.
  
    0.765
CCH86023.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
   
    0.763
CCH90102.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
 
   
 0.759
CCH90635.1
MarR family transcriptional regulator.
   
    0.756
cobB-2
Sir2-family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.723
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.