STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89816.1Homologs of previously reported genes of unknown function. (551 aa)    
Predicted Functional Partners:
CCH89817.1
Metal-dependent hydrolase; Function of strongly homologous gene; enzyme.
       0.752
ftsY
Cell division protein ftsY homolog; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.576
phoA
Alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
  
 
 0.529
CCH89623.1
Alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
  
 
 0.529
CCH87594.1
Homologs of previously reported genes of unknown function.
 
     0.493
CCH89683.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
 
   
 0.462
folE
GTP cyclohydrolase I; Function of strongly homologous gene; enzyme.
    
 0.455
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.431
CCH85589.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.414
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.