STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89829.1Dak phosphatase; Function of strongly homologous gene; enzyme. (569 aa)    
Predicted Functional Partners:
CCH87176.1
Homologs of previously reported genes of unknown function.
 
 0.995
recG
ATP-dependent DNA helicase recG; Function of strongly homologous gene; enzyme.
 
    0.920
CCH89825.1
Homologs of previously reported genes of unknown function.
 
     0.745
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
     0.710
CCH89827.1
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.700
rpmB
50S ribosomal protein L28; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL28 family.
     
 0.670
nagD
N-Acetylglucosamine-6-Phosphatase, Protein nagD; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the HAD-like hydrolase superfamily.
      
 0.657
rpmF
50S ribosomal protein L32 2; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL32 family.
       0.527
CCH89824.1
Homologs of previously reported genes of unknown function.
       0.527
CCH89265.1
Homologs of previously reported genes of unknown function.
 
  
 0.507
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.