STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89835.1Homologs of previously reported genes of unknown function. (179 aa)    
Predicted Functional Partners:
CCH89834.1
Transcriptional regulator, AsnC family; Function of strongly homologous gene; regulator.
       0.684
CCH88948.1
Putative metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.662
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.588
CCH87217.1
Putative monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.580
CCH90427.1
Homologs of previously reported genes of unknown function.
  
     0.523
CCH86507.1
Homologs of previously reported genes of unknown function.
  
     0.508
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.494
CCH90726.1
Putative Zn-dependent protease-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.488
CCH90213.1
Homologs of previously reported genes of unknown function.
  
     0.486
CCH90424.1
Conserved protein of unknown function, putative Carboxypeptidase domain; Homologs of previously reported genes of unknown function.
  
     0.472
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.