STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89851.1Putative protease (CAAX amino terminal family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)    
Predicted Functional Partners:
gltX
Glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.815
CCH89853.1
Fumarylacetoacetate hydrolase family protein; Function of strongly homologous gene; enzyme.
       0.796
CCH89854.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.654
CCH87263.1
Peptidoglycan-binding lysin domain protein (fragment); Function of strongly homologous gene; cell process.
 
     0.635
CCH87217.1
Putative monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.622
CCH89320.1
Homologs of previously reported genes of unknown function.
  
     0.581
CCH90213.1
Homologs of previously reported genes of unknown function.
  
    0.559
CCH89013.1
Homologs of previously reported genes of unknown function.
  
     0.551
CCH85577.1
Homologs of previously reported genes of unknown function.
  
     0.502
CCH90863.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; factor.
 
     0.497
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.