STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH89858.1Putative Subtilisin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S8 family. (1073 aa)    
Predicted Functional Partners:
CCH85557.1
Homologs of previously reported genes of unknown function.
  
     0.578
CCH89686.1
Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator.
  
     0.562
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
     
 0.554
CCH86580.1
Putative Extracellular solute-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.514
CCH86774.1
Homologs of previously reported genes of unknown function.
  
 0.487
CCH88002.1
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
    0.477
CCH88960.1
Homologs of previously reported genes of unknown function.
 
 0.469
CCH89047.1
Homologs of previously reported genes of unknown function.
  
     0.455
apeH
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; Function of strongly homologous gene; enzyme.
  
    0.448
CCH89612.1
Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme.
 
 
 0.446
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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