STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase; Function of strongly homologous gene; enzyme. (394 aa)    
Predicted Functional Partners:
sufU
FeS cluster assembly, scaffold; Function of strongly homologous gene; cell process.
  
 0.998
moeB
Molybdopterin-synthase sulfurylase; Function of strongly homologous gene; enzyme.
 
 
 0.985
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.931
CCH89006.1
Putative thiosulfate sulfurtransferase sseB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.921
cysA-2
Thiosulfate sulfurtransferase; Function of strongly homologous gene; enzyme.
  
 0.921
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
    
 0.920
erpA
Iron-sulfur cluster insertion protein erpA; Function of strongly homologous gene; factor; Belongs to the HesB/IscA family.
 
  
 0.892
CCH86574.1
Transcriptional regulator, Rrf2 family; Function of strongly homologous gene; regulator.
  
  
 0.859
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
  
 0.800
accC
Carbamoyl-phosphate synthase L chain ATP-binding protein; Function of strongly homologous gene; enzyme.
 
 
 0.794
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.