STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89883.1Major Facilitator Superfamily arabinose transporter; Function of strongly homologous gene; transporter. (470 aa)    
Predicted Functional Partners:
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.781
iscS
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
       0.781
CCH87692.1
Major facilitator superfamily MFS_1 (fragment); Function of strongly homologous gene; transporter.
  
     0.736
CCH86792.1
Drug resistance transporter, EmrB/QacA subfamily; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
    0.729
CCH88163.1
Putative antibiotic antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
  
     0.716
CCH86011.1
Major facilitator superfamily, general substrate transporter; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
     0.709
CCH85534.1
Transmembrane efflux protein; Function of strongly homologous gene; transporter.
  
    0.697
CCH88301.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
     0.695
CCH86789.1
Drug resistance protein; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
     0.688
CCH87527.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
     0.603
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.