STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89905.1Homologs of previously reported genes of unknown function. (474 aa)    
Predicted Functional Partners:
CCH90524.1
Homologs of previously reported genes of unknown function.
  
    0.767
CCH90185.1
Homologs of previously reported genes of unknown function.
  
   
 0.748
CCH86511.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.734
CCH86190.1
Protein of unknown function; No homology to any previously reported sequences.
  
  
  0.733
secA-2
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 0.727
CCH89945.1
Homologs of previously reported genes of unknown function.
  
     0.705
CCH90037.1
Homologs of previously reported genes of unknown function.
 
    0.703
CCH86635.1
Homologs of previously reported genes of unknown function.
  
    0.700
CCH86225.1
Homologs of previously reported genes of unknown function.
 
     0.689
guaA
GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase); Catalyzes the synthesis of GMP from XMP.
  
 
  0.689
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.