STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89906.1Membrane protein of unknown function; No homology to any previously reported sequences. (624 aa)    
Predicted Functional Partners:
CCH89907.1
LPXTG-motif cell wall anchor domain protein; Function of strongly homologous gene; structure.
       0.719
CCH89908.1
Peptidase C60 sortase A and B; Function of strongly homologous gene; enzyme.
       0.670
CCH86651.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
  
 
 0.485
CCH89905.1
Homologs of previously reported genes of unknown function.
       0.446
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
     
 0.405
CCH86413.1
Polysaccharide deacetylase; Function of strongly homologous gene; enzyme.
  
 
 0.400
CCH88464.1
Putative Predicted xylanase/chitin deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.400
CCH88491.1
Polysaccharide deacetylase; Function of strongly homologous gene; enzyme.
  
 
 0.400
CCH90659.1
Putative Polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.