Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH89950.1Homologs of previously reported genes of unknown function. (260 aa)    
Predicted Functional Partners:
CCH89949.1
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; transporter.
 
     0.891
CCH87235.1
Homologs of previously reported genes of unknown function.
  
     0.581
CCH87738.1
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.535
CCH88904.1
ABC transporter membrane protein; Function of strongly homologous gene; transporter.
 
 0.515
CCH86231.1
Putative ABC transporter (permease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.504
CCH88079.1
Homologs of previously reported genes of unknown function.
 
   0.497
sucA
2-oxoglutarate decarboxylase; Function of strongly homologous gene; enzyme.
   
 
 0.482
CCH89945.1
Homologs of previously reported genes of unknown function.
 
     0.481
CCH89953.1
Homologs of previously reported genes of unknown function.
 
     0.476
cya
Family 3 adenylate cyclase; Function of strongly homologous gene; enzyme.
       0.473
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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