STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
psdPhosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (220 aa)    
Predicted Functional Partners:
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.998
pgsA-2
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.823
CCH88779.1
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.821
CCH87847.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.793
CCH88104.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.750
CCH90359.1
CDP-alcohol phosphatidyltransferase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.745
betA
Choline dehydrogenase; Function of strongly homologous gene; enzyme.
     
  0.741
ats
N-acetyltransferase; Function of strongly homologous gene; enzyme.
       0.737
recA
Recombinase A (recA); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
 0.720
nagD
N-Acetylglucosamine-6-Phosphatase, Protein nagD; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the HAD-like hydrolase superfamily.
       0.648
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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