STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH89963.1Putative Sphingosine/diacylglycerol kinase-like enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (321 aa)    
Predicted Functional Partners:
CCH90417.1
Conserved protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
 
   
 0.705
CCH89962.1
Homologs of previously reported genes of unknown function.
       0.658
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
     
 0.610
CCH86184.1
Homologs of previously reported genes of unknown function.
  
     0.545
CCH90223.1
Monofunctional chorismate mutase; Function of strongly homologous gene; enzyme.
  
     0.516
CCH90621.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
      
 0.481
CCH90235.1
Homologs of previously reported genes of unknown function.
  
     0.447
CCH86129.1
Homologs of previously reported genes of unknown function.
  
     0.445
CCH88613.1
Homologs of previously reported genes of unknown function.
  
     0.426
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.