Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH89970.1Putative sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (111 aa)    
Predicted Functional Partners:
rpoE-3
RNA polymerase sigma-E factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.928
whiB-4
Transcription factor, WhiB family; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.702
CCH90398.1
Homologs of previously reported genes of unknown function.
  
     0.691
CCH86129.1
Homologs of previously reported genes of unknown function.
  
     0.613
CCH89359.1
Homologs of previously reported genes of unknown function.
  
     0.582
CCH90045.1
Homologs of previously reported genes of unknown function.
  
    0.576
CCH88084.1
Homologs of previously reported genes of unknown function.
 
     0.561
CCH90424.1
Conserved protein of unknown function, putative Carboxypeptidase domain; Homologs of previously reported genes of unknown function.
  
     0.550
CCH89972.1
Homologs of previously reported genes of unknown function; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.539
tatB
Twin-arginine translocation protein, TatB subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
    0.533
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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