STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89980.1Homologs of previously reported genes of unknown function. (60 aa)    
Predicted Functional Partners:
CCH85982.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.717
CCH85981.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.657
CCH85983.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
     0.650
CCH87440.1
Homologs of previously reported genes of unknown function.
  
     0.642
CCH86951.1
Homologs of previously reported genes of unknown function.
  
     0.608
CCH85986.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
 
     0.590
CCH89981.1
Inositol-phosphate phosphatase; Function of strongly homologous gene; enzyme.
       0.576
CCH90562.1
Putative DNA methylase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.575
CCH86535.1
ADP-heptose:LPS heptosyltransferase (fragment) (modular protein); Function of strongly homologous gene; enzyme.
 
     0.557
CCH89979.1
Putative regulator, ArsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.557
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.