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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89984.1Homologs of previously reported genes of unknown function. (161 aa)    
Predicted Functional Partners:
CCH90826.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; Function of strongly homologous gene; enzyme.
 
  
 0.835
xylB-3
Xylulose kinase; Function of strongly homologous gene; enzyme; Belongs to the FGGY kinase family.
       0.773
CCH89985.1
Aldo-keto reductase [NADP+]; Function of strongly homologous gene; enzyme.
       0.773
coxS-3
Carbon-monoxide dehydrogenase Fe-S binding small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.754
coxS-2
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.742
CCH89500.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.738
coxS
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.730
CCH87822.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Function of strongly homologous gene; enzyme.
 
  
 0.708
coxL-2
Carbon-monoxide dehydrogenase, molybdopterin binding, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.699
CCH87823.1
Putative xanthine dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.676
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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