STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH89992.1Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme. (289 aa)    
Predicted Functional Partners:
CCH85980.1
Putative D,D-heptose 1,7-bisphosphate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.752
CCH90835.1
Carbamoyl transferase; Function of strongly homologous gene; enzyme.
 
    0.741
CCH89991.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
   
   0.624
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.619
CCH85981.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
 
   
 0.617
CCH85982.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
    0.590
CCH85983.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
    0.568
CCH85986.1
ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme.
 
   
 0.522
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
     
 0.458
CCH85909.1
Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme.
  
     0.453
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.