STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90001.1Phosphinothricin N-acetyltransferase; Function of strongly homologous gene; enzyme. (186 aa)    
Predicted Functional Partners:
CCH90000.1
Conserved secreted protein of unknown function: putative PE-PGRS domain; Homologs of previously reported genes of unknown function.
       0.762
CCH90002.1
Putative DNA/RNA helicase, superfamily II, SNF2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.746
CCH90003.1
Homologs of previously reported genes of unknown function.
       0.547
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
       0.474
galT
Galactose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
       0.474
CCH89997.1
Putative Acyl-CoA N-acyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.439
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.