STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90006.1Conserved protein of unknown function, putative zinc-binding site; Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
CCH90008.1
Putative ubiquinone chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.538
uvrD
DNA/RNA helicase, superfamily I; Function of strongly homologous gene; enzyme.
      0.533
CCH90007.1
Putative UBA/THIF-type NAD/FAD binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.513
CCH87291.1
Homologs of previously reported genes of unknown function.
  
     0.505
CCH86594.1
Homologs of previously reported genes of unknown function.
 
     0.431
ribD-2
Bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.431
CCH86999.1
Thioredoxin, DSBA-like; Function of strongly homologous gene; carrier.
  
    0.415
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.