STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH90007.1Putative UBA/THIF-type NAD/FAD binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (362 aa)    
Predicted Functional Partners:
moaE-2
Molybdopterin synthase large subunit; Function of strongly homologous gene; enzyme.
  
 0.863
CCH90008.1
Putative ubiquinone chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.768
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
 
 0.720
iscS
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
   
 0.657
thiD
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.642
CCH90015.1
Homologs of previously reported genes of unknown function.
 
  0.610
pheT
Phenylalanyl-tRNA synthetase beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
 0.605
CCH86839.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.598
mobA
Molybdopterin-guanine dinucleotide synthase; Function of strongly homologous gene; enzyme.
 
 
 0.584
thiS
ThiamineS; Function of strongly homologous gene; cell process.
  
 0.581
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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