STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90034.1Conserved protein of unknown function, putative ATP-binding domain; Homologs of previously reported genes of unknown function. (76 aa)    
Predicted Functional Partners:
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.743
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit; Function of strongly homologous gene; enzyme.
  
     0.689
CCH89326.1
Nucleic acid binding OB-fold tRNA/helicase; Function of strongly homologous gene; enzyme.
  
     0.616
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.557
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit; Function of strongly homologous gene; enzyme.
  
     0.548
CCH90033.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
       0.524
CCH89026.1
Cytochrome oxidase assembly protein; Function of strongly homologous gene; cell process.
  
     0.521
CCH88880.1
Homologs of previously reported genes of unknown function.
  
     0.517
CCH88829.1
Homologs of previously reported genes of unknown function.
  
     0.493
mshB
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
  
     0.492
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.