STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90043.1Homologs of previously reported genes of unknown function. (274 aa)    
Predicted Functional Partners:
CCH90045.1
Homologs of previously reported genes of unknown function.
 
     0.720
CCH90235.1
Homologs of previously reported genes of unknown function.
  
     0.629
CCH90044.1
Putative metal-dependent phosphoesterase, PHP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.622
CCH88856.1
Homologs of previously reported genes of unknown function.
  
     0.575
thyX
Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
   
 0.560
CCH88615.1
Conserved protein of unknown function, putative Tetratricopeptide repeats; Homologs of previously reported genes of unknown function.
  
     0.548
CCH88754.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.542
CCH90046.1
Homologs of previously reported genes of unknown function.
       0.476
CCH85491.1
Homologs of previously reported genes of unknown function.
  
     0.472
dacD
Protein of unknown function; Gene remnant; Belongs to the peptidase S11 family.
  
     0.463
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.