STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90045.1Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
CCH90046.1
Homologs of previously reported genes of unknown function.
       0.829
CCH85706.1
Homologs of previously reported genes of unknown function.
 
  
 0.735
CCH90044.1
Putative metal-dependent phosphoesterase, PHP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.734
CCH90043.1
Homologs of previously reported genes of unknown function.
 
     0.720
CCH88856.1
Homologs of previously reported genes of unknown function.
  
     0.573
polC
DNA-directed DNA polymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.567
CCH89970.1
Putative sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
    0.565
CCH90047.1
Homologs of previously reported genes of unknown function.
       0.561
CCH87226.1
Homologs of previously reported genes of unknown function.
 
    0.542
nudF-2
ADP-ribose pyrophosphatase; Function of strongly homologous gene; enzyme; Belongs to the Nudix hydrolase family.
 
    0.461
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.