STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90045.1Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
CCH90046.1
Homologs of previously reported genes of unknown function.
       0.836
CCH90044.1
Putative metal-dependent phosphoesterase, PHP family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.741
CCH85706.1
Homologs of previously reported genes of unknown function.
 
  
 0.733
CCH90043.1
Homologs of previously reported genes of unknown function.
 
     0.709
CCH89970.1
Putative sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
    0.576
CCH88856.1
Homologs of previously reported genes of unknown function.
  
     0.573
polC
DNA-directed DNA polymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.566
CCH90047.1
Homologs of previously reported genes of unknown function.
       0.544
CCH87226.1
Homologs of previously reported genes of unknown function.
 
    0.515
CCH86225.1
Homologs of previously reported genes of unknown function.
  
    0.460
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.