STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90047.1Homologs of previously reported genes of unknown function. (207 aa)    
Predicted Functional Partners:
SsgA
Sporulation and cell division protein, SsgA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
  
     0.768
CCH88820.1
Trp biosynthesis associated, transmembrane protein, Oprn/Chp; Function of strongly homologous gene; enzyme.
  
     0.734
CCH87504.1
Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.720
CCH89953.1
Homologs of previously reported genes of unknown function.
  
     0.695
CCH89683.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
  
     0.683
CCH87500.1
Homologs of previously reported genes of unknown function.
  
     0.648
CCH88615.1
Conserved protein of unknown function, putative Tetratricopeptide repeats; Homologs of previously reported genes of unknown function.
  
     0.634
CCH88613.1
Homologs of previously reported genes of unknown function.
  
     0.625
CCH90426.1
Thioredoxin; Function of strongly homologous gene; carrier.
  
     0.603
CCH88091.1
Homologs of previously reported genes of unknown function.
  
     0.568
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.