STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90055.1ATPase involved in chromosome partitioning; Function of strongly homologous gene; enzyme. (426 aa)    
Predicted Functional Partners:
CCH90056.1
Homologs of previously reported genes of unknown function; putative enzyme.
 
    0.965
CCH90057.1
DNA-binding protein, excisionase family; Function of strongly homologous gene; enzyme.
 
     0.914
CCH86665.1
Type II secretion system protein TadB; Function of strongly homologous gene; transporter.
 
 
 0.886
CCH86666.1
Type II secretion system F protein; Function of strongly homologous gene; cell process.
 
 
 0.884
CCH86668.1
Homologs of previously reported genes of unknown function.
 
  
 0.847
CCH90058.1
Homologs of previously reported genes of unknown function.
  
     0.775
CCH86669.1
Homologs of previously reported genes of unknown function.
  
     0.765
CCH90059.1
Homologs of previously reported genes of unknown function.
 
     0.757
CCH86371.1
Flp pilus assembly protein CpaB, SAF domain; Function of strongly homologous gene; cell process.
  
 
 0.724
CCH86779.1
Homologs of previously reported genes of unknown function.
  
 
 0.724
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.