STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtrBTwo component sensor histidine kinase mtrB; Function of strongly homologous gene; enzyme. (577 aa)    
Predicted Functional Partners:
mtrA
Two component DNA-binding response regulator mtrA; Function of strongly homologous gene; regulator.
 0.995
CCH90067.1
Lipoprotein LpqB, beta-propeller domain-like protein; Function of strongly homologous gene; cell process.
    0.901
phoB-2
Two-component Pi uptake response regulator, system with PhoR (OmpR family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 0.892
mprA
Response regulator mprA; Function of strongly homologous gene; regulator.
 0.883
phoB
Two component phosphate regulon transcriptional regulatory protein phoB; Function of strongly homologous gene; regulator.
 0.867
mprA-2
Response regulator mprA; Function of strongly homologous gene; regulator.
 0.866
kdpE
Two-component system, OmpR family, KDP operon response regulator KdpE; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 0.822
CCH90066.1
Predicted amidophosphoribosyltransferase; Function of strongly homologous gene; carrier.
 
    0.767
cheY-2
Chemotaxis protein cheY; Function of strongly homologous gene; regulator.
 
 
 0.734
glnR
Transcriptional regulator, glnR family; Function of strongly homologous gene; regulator.
 
 0.731
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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