STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90077.1Homologs of previously reported genes of unknown function. (117 aa)    
Predicted Functional Partners:
CCH87277.1
Homologs of previously reported genes of unknown function.
  
     0.739
CCH90079.1
Homologs of previously reported genes of unknown function.
 
     0.722
CCH86205.1
Conserved exported protein of unknown function, putative Enoyl-CoA hydratase domain; Homologs of previously reported genes of unknown function.
   
    0.717
manB
Phosphomannomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.693
CCH90074.1
Putative phospho-glucose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.637
CCH90075.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0434 family.
       0.637
whiB-5
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.609
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.603
CCH89312.1
Homologs of previously reported genes of unknown function.
  
     0.592
CCH90078.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.541
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.