STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90077.1Homologs of previously reported genes of unknown function. (117 aa)    
Predicted Functional Partners:
CCH86205.1
Conserved exported protein of unknown function, putative Enoyl-CoA hydratase domain; Homologs of previously reported genes of unknown function.
   
    0.767
CCH87277.1
Homologs of previously reported genes of unknown function.
  
     0.739
CCH90079.1
Homologs of previously reported genes of unknown function.
 
     0.719
manB
Phosphomannomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.688
CCH90074.1
Putative phospho-glucose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.631
CCH90075.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0434 family.
       0.631
whiB-5
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.599
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.593
CCH89312.1
Homologs of previously reported genes of unknown function.
  
     0.592
CCH90073.1
Cation diffusion facilitator family transporter (fragment); Function of strongly homologous gene; transporter.
       0.542
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.