STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90078.1Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (250 aa)    
Predicted Functional Partners:
CCH90107.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; Function of strongly homologous gene; enzyme; Belongs to the UbiA prenyltransferase family.
 
  
 0.786
CCH90106.1
Putative decaprenylphosphoryl-beta-D-ribose oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.785
CCH90158.1
Homologs of previously reported genes of unknown function.
 
     0.743
CCH90079.1
Homologs of previously reported genes of unknown function.
       0.574
CCH90077.1
Homologs of previously reported genes of unknown function.
       0.541
CCH90100.1
Function of strongly homologous gene; enzyme.
 
   
 0.512
CCH90089.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
   
 0.503
CCH90080.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.460
CCH86172.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.419
CCH86005.1
Conserved protein of unknown function with LGFP domains; No homology to any previously reported sequences.
  
     0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.