STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manCMannose-1-phosphate guanylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (366 aa)    
Predicted Functional Partners:
manB
Phosphomannomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.970
CCH90168.1
Putative phosphomannomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.924
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
  
  
 0.902
CCH90093.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.814
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
     0.648
CCH90090.1
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; Function of strongly homologous gene; enzyme.
  
    0.582
CCH85932.1
Glycosyl transferase group 1; Function of strongly homologous gene; enzyme.
 
  
 0.573
CCH88119.1
dTDP-glucose 4,6-dehydratase, polysaccharide biosynthesis protein CapD; Function of strongly homologous gene; enzyme.
  
  
 0.517
CCH90094.1
Putative Arabinofuranosyltransferase aftA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.515
CCH90091.1
3-hydroxyacyl-CoA dehydrogenase (short-chain); Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.514
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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