Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90102.1Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator. (514 aa)    
Predicted Functional Partners:
CCH89774.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
 
   
 0.759
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.627
CCH90089.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
     
 0.626
CCH90103.1
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.559
CCH87177.1
Competence protein ComEA-like protein with helix-hairpin-helix repeat region; Function of strongly homologous gene; cell process.
 
     0.549
CCH88603.1
Thiamin pyrophosphokinase, catalytic region; Function of strongly homologous gene; enzyme.
  
    0.549
CCH90037.1
Homologs of previously reported genes of unknown function.
  
     0.549
CCH89931.1
Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.543
CCH90104.1
Protein of unknown function; No homology to any previously reported sequences.
       0.517
lepB
Signal peptidase I; Function of strongly homologous gene; enzyme; Belongs to the peptidase S26 family.
 
   
 0.512
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.