STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90131.1Homologs of previously reported genes of unknown function. (188 aa)    
Predicted Functional Partners:
CCH85706.1
Homologs of previously reported genes of unknown function.
 
  
 0.680
CCH86997.1
Homologs of previously reported genes of unknown function.
  
    0.650
CCH87391.1
Homologs of previously reported genes of unknown function.
  
     0.539
CCH85720.1
Homologs of previously reported genes of unknown function.
  
     0.531
CCH90940.1
Homologs of previously reported genes of unknown function.
  
     0.479
CCH89715.1
Phage shock protein A, PspA; Function of strongly homologous gene; cell process.
  
    0.478
CCH88923.1
Conserved protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.477
CCH90130.1
Putative acyltransferase 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.457
CCH90127.1
Putative ATP-dependent dsDNA exonuclease (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.442
CCH90128.1
Putative ATP-dependent dsDNA exonuclease (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.442
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.