STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90155.1Putative enzyme (AIG2-like family protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (152 aa)    
Predicted Functional Partners:
lpdA
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; Function of strongly homologous gene; enzyme.
  
  
 0.789
CCH90424.1
Conserved protein of unknown function, putative Carboxypeptidase domain; Homologs of previously reported genes of unknown function.
  
     0.635
CCH90053.1
Homologs of previously reported genes of unknown function.
  
     0.612
CCH90158.1
Homologs of previously reported genes of unknown function.
 
     0.589
CCH87208.1
Cytidine deaminase; Function of strongly homologous gene; enzyme.
  
     0.531
CCH87585.1
Sulfotransferase.
  
   
 0.530
ispD
4-diphosphocytidyl-2-methyl-D-erythritol synthase; Function of strongly homologous gene; enzyme.
       0.508
CCH86184.1
Homologs of previously reported genes of unknown function.
  
     0.501
CCH90157.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.489
CCH89766.1
Homologs of previously reported genes of unknown function.
  
     0.461
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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