STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90158.1Homologs of previously reported genes of unknown function. (138 aa)    
Predicted Functional Partners:
CCH90100.1
Function of strongly homologous gene; enzyme.
 
   
 0.833
CCH90157.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.775
CCH90105.1
Putative Short-chain dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.746
CCH90078.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.743
ispD
4-diphosphocytidyl-2-methyl-D-erythritol synthase; Function of strongly homologous gene; enzyme.
       0.741
CCH90106.1
Putative decaprenylphosphoryl-beta-D-ribose oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.715
CCH90107.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; Function of strongly homologous gene; enzyme; Belongs to the UbiA prenyltransferase family.
 
     0.715
CCH90097.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
   
 0.689
CCH90099.1
ABC-2 type transporter; Function of strongly homologous gene; transporter.
 
  
 0.666
CCH86386.1
Glucose/sorbosone dehydrogenase; Function of strongly homologous gene; enzyme.
  
     0.640
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.