STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH90171.1Putative transcriptional regulatory protein (AsnC-family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (152 aa)    
Predicted Functional Partners:
cysG
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
 
 0.697
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
    
 0.578
CCH90170.1
Putative deacetylase/succinyl-diaminopimelate desuccinylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.529
CCH86023.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
   
    0.495
CCH88048.1
Transcriptional regulator, AsnC family; Function of strongly homologous gene; regulator.
  
   
0.407
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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