STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90175.1DNA binding domain, excisionase family; Function of strongly homologous gene; enzyme. (143 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the UPRTase family.
  
    0.547
CCH90173.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.545
mnhA-2
NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; Function of strongly homologous gene; enzyme.
       0.531
mnhC-2
Multisubunit Na+/H+ antiporter, MnhC subunit; Function of strongly homologous gene; transporter.
       0.531
mnhD-2
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; Function of strongly homologous gene; transporter.
       0.531
mnhE-2
Multisubunit Na+/H+ antiporter, MnhE subunit; Function of strongly homologous gene; transporter.
       0.531
mnhF-2
Multisubunit Na+/H+ antiporter, MnhF subunit; Function of strongly homologous gene; transporter.
       0.531
mnhG-2
Monovalent cation/proton antiporter, MnhG/PhaG subunit; Function of strongly homologous gene; transporter.
       0.531
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.457
ald-2
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
       0.457
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.