STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90188.1ABC-type multidrug transport system, permease component; Function of strongly homologous gene; transporter. (270 aa)    
Predicted Functional Partners:
CCH90189.1
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
  0.960
CCH86520.1
ABC transporter, ATPase; Function of strongly homologous gene; enzyme.
 
  0.833
CCH86073.1
ABC transporter, ATPase component; Function of strongly homologous gene; transporter.
 
  0.760
CCH88835.1
Nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.612
CCH88971.1
Sulfate-transporting ATPase; Function of strongly homologous gene; enzyme.
 
 
  0.546
CCH86304.1
ABC efflux pump, inner membrane subunit, DrrB family; Function of strongly homologous gene; transporter.
  
  
 0.532
add-2
Adenosine deaminase; Function of strongly homologous gene; enzyme.
       0.532
CCH90192.1
Nucleoside ABC transporter membrane protein; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
    0.530
CCH86456.1
ABC-type transport system, ATP-binding protein; Function of strongly homologous gene; enzyme.
 
 
  0.509
CCH86440.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; Function of strongly homologous gene; transporter.
  
  
  0.506
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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