STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE-2UDP-glucose 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (317 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
  
 0.982
CCH87760.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.921
galK-2
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.898
galK
Galactokinase; Function of strongly homologous gene; enzyme; Belongs to the GHMP kinase family.
 
 0.896
rfbD-2
UDP-galactopyranose mutase; Function of strongly homologous gene; enzyme.
 
  
 0.879
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.874
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
    
 0.777
manC
Mannose-1-phosphate guanylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.756
capI
UDP-glucose epimerase; Function of strongly homologous gene; enzyme.
 
 
0.732
CCH86243.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
 
 0.728
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.