STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90213.1Homologs of previously reported genes of unknown function. (398 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.726
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.697
CCH89013.1
Homologs of previously reported genes of unknown function.
  
     0.680
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.667
CCH89929.1
Homologs of previously reported genes of unknown function.
  
     0.651
CCH88706.1
Homologs of previously reported genes of unknown function.
  
     0.640
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.636
CCH90210.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.631
CCH90214.1
Homologs of previously reported genes of unknown function.
       0.613
CCH88697.1
Homologs of previously reported genes of unknown function.
  
     0.605
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.