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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCPhage shock protein C, PspC; Function of strongly homologous gene; cell process. (310 aa)    
Predicted Functional Partners:
CCH89715.1
Phage shock protein A, PspA; Function of strongly homologous gene; cell process.
  
 
 0.987
CCH89739.1
Homologs of previously reported genes of unknown function.
  
  
 0.891
CCH90228.1
Two-component signal transduction histidine kinase (transduction signal); Function of strongly homologous gene; regulator.
 
  
0.874
CCH90875.1
Homologs of previously reported genes of unknown function.
  
    0.803
CCH90231.1
Homologs of previously reported genes of unknown function.
       0.773
CCH87233.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
  
 0.768
CCH88277.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
  
  
 0.739
CCH85690.1
Two component integral membrane signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
  
 0.737
liaS
Two component signal transduction histidine kinase involved in sensing cell wall stress response; Function of strongly homologous gene; enzyme.
  
  
 0.737
CCH87010.1
Histidine kinase; Function of strongly homologous gene; enzyme.
  
  
 0.737
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.