Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH90320.1Acyl dehydratase; Function of strongly homologous gene; enzyme. (140 aa)    
Predicted Functional Partners:
CCH90321.1
Acyl dehydratase; Function of strongly homologous gene; enzyme; Belongs to the UPF0336 family.
 0.999
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH]; Function of strongly homologous gene; enzyme.
 
 
 0.891
fabD-2
Malonyl CoA-acyl carrier protein transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.851
CCH90319.1
Putative alanine aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.779
rpmG
50S ribosomal protein L33 2; Function of strongly homologous gene; structure; Belongs to the bacterial ribosomal protein bL33 family.
       0.761
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
  
  
 0.746
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
 0.744
CCH87283.1
Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.688
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  
 0.682
adk-2
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
  
 0.682
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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