STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90352.1HNH endonuclease; Function of strongly homologous gene; enzyme. (542 aa)    
Predicted Functional Partners:
CCH90867.1
HNH endonuclease; Function of strongly homologous gene; enzyme.
  
     0.769
CCH90919.1
HNH endonuclease.
  
     0.756
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.600
CCH90387.1
Homologs of previously reported genes of unknown function.
  
     0.600
CCH86669.1
Homologs of previously reported genes of unknown function.
  
     0.598
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.572
CCH86392.1
Homologs of previously reported genes of unknown function.
 
     0.557
CCH86232.1
Putative HAD hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.554
CCH90056.1
Homologs of previously reported genes of unknown function; putative enzyme.
  
     0.553
CCH88758.1
Homologs of previously reported genes of unknown function.
 
     0.525
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.