STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90385.1DNA binding domain protein, excisionase family; Function of strongly homologous gene; enzyme. (114 aa)    
Predicted Functional Partners:
CCH87277.1
Homologs of previously reported genes of unknown function.
  
     0.537
CCH86048.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
  
     0.523
CCH90382.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Function of strongly homologous gene; enzyme.
       0.501
galE-3
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
       0.501
CCH90389.1
Homologs of previously reported genes of unknown function.
 
     0.492
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.481
CCH86129.1
Homologs of previously reported genes of unknown function.
 
     0.480
CCH86184.1
Homologs of previously reported genes of unknown function.
  
     0.458
CCH87296.1
Homologs of previously reported genes of unknown function.
 
     0.448
CCH89312.1
Homologs of previously reported genes of unknown function.
  
     0.430
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.