Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90387.1Homologs of previously reported genes of unknown function. (324 aa)    
Predicted Functional Partners:
CCH90388.1
Exopolyphosphatase; Function of strongly homologous gene; enzyme.
       0.836
CCH86190.1
Protein of unknown function; No homology to any previously reported sequences.
  
   
 0.765
CCH86537.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.725
CCH90037.1
Homologs of previously reported genes of unknown function.
  
     0.724
CCH89894.1
Homologs of previously reported genes of unknown function.
  
     0.721
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.720
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.716
CCH90524.1
Homologs of previously reported genes of unknown function.
  
     0.707
CCH86635.1
Homologs of previously reported genes of unknown function.
  
     0.700
CCH89905.1
Homologs of previously reported genes of unknown function.
  
     0.685
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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