STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90389.1Homologs of previously reported genes of unknown function. (290 aa)    
Predicted Functional Partners:
CCH90387.1
Homologs of previously reported genes of unknown function.
       0.684
CCH90388.1
Exopolyphosphatase; Function of strongly homologous gene; enzyme.
       0.684
CCH90398.1
Homologs of previously reported genes of unknown function.
  
     0.622
CCH86562.1
Homologs of previously reported genes of unknown function.
  
     0.608
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.606
CCH86587.1
GCN5-related N-acetyltransferase.
  
     0.585
CCH88954.1
Homologs of previously reported genes of unknown function.
  
     0.525
CCH90385.1
DNA binding domain protein, excisionase family; Function of strongly homologous gene; enzyme.
 
     0.485
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
  
     0.455
CCH90382.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Function of strongly homologous gene; enzyme.
 
     0.448
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.