STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90392.1Homologs of previously reported genes of unknown function. (73 aa)    
Predicted Functional Partners:
CCH90391.1
Homologs of previously reported genes of unknown function.
       0.757
CCH86363.1
Homologs of previously reported genes of unknown function.
  
     0.627
CCH90788.1
Homologs of previously reported genes of unknown function.
  
     0.543
CCH90390.1
Transcriptional regulator, AraC family with amidase-like domain; Function of strongly homologous gene; regulator.
       0.528
CCH86515.1
Putative glyoxylase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.522
katA
Manganese-containing catalase; Function of strongly homologous gene; enzyme.
 
     0.514
CCH90617.1
Homologs of previously reported genes of unknown function.
  
     0.514
CCH90583.1
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.486
CCH86625.1
Putative lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.474
CCH86801.1
Homologs of previously reported genes of unknown function.
  
     0.456
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.