STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90424.1Conserved protein of unknown function, putative Carboxypeptidase domain; Homologs of previously reported genes of unknown function. (97 aa)    
Predicted Functional Partners:
cysA-2
Thiosulfate sulfurtransferase; Function of strongly homologous gene; enzyme.
 
  
 0.947
CCH87208.1
Cytidine deaminase; Function of strongly homologous gene; enzyme.
  
     0.772
CCH86839.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.758
CCH89766.1
Homologs of previously reported genes of unknown function.
  
     0.736
CCH87504.1
Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.703
CCH86997.1
Homologs of previously reported genes of unknown function.
  
     0.701
CCH90398.1
Homologs of previously reported genes of unknown function.
  
     0.700
CCH90426.1
Thioredoxin; Function of strongly homologous gene; carrier.
 
     0.690
CCH86052.1
Arsenite-transporting ATPase; Function of strongly homologous gene; enzyme.
  
     0.686
CCH88000.1
Homologs of previously reported genes of unknown function.
  
     0.648
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.