STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH90436.1Cell envelope-related transcriptional attenuator (fragment). (520 aa)    
Predicted Functional Partners:
CCH89774.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
 
  
 0.802
CCH90437.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CCH90562.1
Putative DNA methylase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.585
CCH90438.1
Homologs of previously reported genes of unknown function.
 
     0.557
secG
Protein-export membrane protein secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.540
CCH87736.1
Membrane protein of unknown function, putative kinase domain; No homology to any previously reported sequences.
  
     0.524
ftsX
Cell division protein ftsX homolog; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.471
CCH88728.1
Conserved protein of unknown function, putative coiled-coil domain; Homologs of previously reported genes of unknown function.
  
     0.461
CCH86229.1
Protein of unknown function; No homology to any previously reported sequences.
  
   
 0.446
CCH90115.1
Homologs of previously reported genes of unknown function.
  
  
  0.440
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.