STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90438.1Homologs of previously reported genes of unknown function. (323 aa)    
Predicted Functional Partners:
CCH90185.1
Homologs of previously reported genes of unknown function.
  
     0.669
CCH90524.1
Homologs of previously reported genes of unknown function.
  
     0.669
pgsA
Phosphatidylglycerophosphate synthase; Function of strongly homologous gene; enzyme.
  
     0.660
CCH90892.1
Chemotaxis protein histidine kinase; Function of strongly homologous gene; enzyme.
  
 
 0.632
CCH86635.1
Homologs of previously reported genes of unknown function.
  
     0.585
CCH87831.1
Homologs of previously reported genes of unknown function.
  
     0.577
CCH90436.1
Cell envelope-related transcriptional attenuator (fragment).
 
     0.558
CCH86453.1
Homologs of previously reported genes of unknown function.
  
     0.543
CCH85720.1
Homologs of previously reported genes of unknown function.
  
     0.517
CCH89867.1
Homologs of previously reported genes of unknown function.
  
     0.511
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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