STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90441.1Siderophore-interacting protein; Function of strongly homologous gene; receptor. (263 aa)    
Predicted Functional Partners:
mprA
Response regulator mprA; Function of strongly homologous gene; regulator.
       0.505
CCH90443.1
Sensor protein; Function of strongly homologous gene; enzyme.
       0.505
fecE-2
Iron-dicitrate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.502
fecE
Iron-dicitrate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.482
CCH90444.1
Putative thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.462
fepD-2
Iron-dicitrate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.442
CCH86559.1
Putative iron uptake ABC transporter substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.433
CCH90440.1
Homologs of previously reported genes of unknown function.
       0.428
CCH90248.1
Periplasmic binding protein.
 
  
 0.420
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.