STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90477.1Homologs of previously reported genes of unknown function. (175 aa)    
Predicted Functional Partners:
CCH86650.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
 
   
 0.638
CCH90478.1
Homologs of previously reported genes of unknown function.
       0.605
CCH90474.1
Membrane protein of unknown function, putative 2Fe-2S ferredoxin domain; No homology to any previously reported sequences.
       0.506
CCH90475.1
VanZ family protein.
       0.506
CCH90476.1
Protein of unknown function; No homology to any previously reported sequences.
       0.506
CCH88898.1
Homologs of previously reported genes of unknown function.
  
     0.487
CCH86892.1
Homologs of previously reported genes of unknown function.
  
     0.479
CCH90037.1
Homologs of previously reported genes of unknown function.
 
     0.458
fliH
Flagellar biosynthesis/type III secretory pathway protein; Function of strongly homologous gene; structure.
  
     0.449
CCH90482.1
Conserved protein of unknown function, putative UDP-Glycosyltransferase/glycogen phosphorylase; Homologs of previously reported genes of unknown function.
 
     0.445
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.